El Instituto de Higiene y la enseñanza de la Bacteriología en Chile

El Instituto de Higiene, fundado por el gobierno de Chile en 1892, aparte de sus funciones en el ámbito de la salud pública, participó activamente en la docencia de pregrado de Bacteriología de la Escuela de Medicina de la Universidad de Chile. La cátedra de Bacteriología fundada en 1895 fue trasladada en 1902 a la sección de seroterapia de dicho instituto (uno de los cinco edificios que formaban el instituto). La cátedra permaneció en ese lugar por tres décadas, siendo trasladada en 1930 por el Dr. Hugo Vaccaro de vuelta a la Escuela de Medicina. Por otra parte, la cátedra extraordinaria de Bacteriología siguió ligada a dicho instituto y a su inmediato sucesor el Instituto Bacteriológico de Chile. Sin embargo, luego del incendio de la Escuela de Medicina en 1948, la cátedra ordinaria tuvo que retornar a sus antiguos edificios en la ribera del Mapocho y paralelamente la cátedra extraordinaria se trasladó a una nueva ubicación en Ñuñoa.

The Institute of Hygiene, founded by the Chilean government in 1892, apart from its functions in the field of public health, actively participated in the undergraduate teaching of Bacteriology at the School of Medicine of the University of Chile. The chair of Bacteriology founded in 1895 was transferred in 1902 to the serotherapy section of the mentioned institute (one of the five buildings that made up the institute). The chair remained in that place for three decades, being transferred by Dr. Hugo Vaccaro back to the School of Medicine in 1930. On the other hand, the Extraordinary Chair of Bacteriology continued to be linked to the said institute and to its immediate successor, the Bacteriological Institute of Chile. However, after the fire at the School of Medicine in 1948, the ordinary chair had to return to its old buildings on the banks of the Mapocho and at the same time the extraordinary chair moved to a new location in Ñuñoa.

Los inicios de la fagoterapia en Chile: los doctores Mercedes Perez Matus y Hugo Vaccaro Kosovich

Mercedes Pérez Matus y Hugo Vaccaro Kosovich fueron destacados médicos y microbiólogos de la cátedra ordinaria de Bacteriología de la Facultad de Medicina de la Universidad de Chile. En 1931, ambos médicos fueron contratados por la Facultad de Medicina para reorganizar la convulsionada Cátedra de Bacteriología luego de la crisis política de 1931. En el mismo período el destacado investigador del instituto Pasteur Eugéne Wollman vino a Chile a dirigir el Instituto Sanitas (1929-1931), incorporando en nuestro país el conocimiento sobre los bacteriófagos y las técnicas para su aislamiento. La prolongada labor docente y de investigación de Vaccaro y Pérez se extendió por casi 40 años (1931-1970). Publicaron numerosos artículos científicos, siendo uno de sus temas preferidos, en los primeros años, el estudio de los bacteriófagos que aprendieron junto a Wollman. En la década de los 40, bajo el liderazgo de los Dres. Vaccaro y Pérez, se inició la fagoterapia en Chile.

Mercedes Perez Matus and Hugo Vaccaro Kosovich were distinguished doctors and microbiologists from the ordinary chair of Bacteriology at the Faculty of Medicine of the University of Chile. In 1931, both doctors were hired by the F aculty of Medicine to reorganize the convulsed Chair of Bacteriology after the political crisis of 1931. In the same period, the prominent Pasteur Institute researcher Eugene Wollman came to Chile to direct the Sanitas Institute (1929-1931), incorporating in our country the knowledge about bacteriophages and the techniques for their isolation. The long teaching and research work of Vaccaro and Pérez spanned almost 40 years (1931-1970). They published numerous scientific articles, being one of their favorite topics, in the early years, the study of bacteriophages that they learned together with Wollman. In the 1940s, under the leadership of Drs. Vaccaro and Pérez, phage therapy began in Chile.

Cultivo primario de Helicobacter pylori a partir de biopsias gástricas obtenidas por endoscopia / Primary culture of Helicobacter pylori from endoscopic gastric biopsies

Objetivo: Determinar la viabilidad del cultivo de la bacteria Helicobacter pylori en Costa Rica por medio de la documentación de toma de muestras, la comparación del diagnóstico histopatológico y la descripción de los diagnósticos asociados a los aislamientos obtenidos con los resultados de la ureasa rápida. Métodos: Investigación descriptiva que involucró a pacientes de entre los 35 y 70 años, de ambos sexos, que asistieron al Servicio de Endoscopia Digestiva del Hospital Clínica Bíblica entre febrero y junio del 2019 para estudio gastroscópico. Se obtuvieron biopsias gástricas para diagnóstico histopatológico, prueba de ureasa rápida y cultivo de Helicobacter pylori. Para este último, se transportaron las biopsias en un medio de transporte semisólido, se maceró el tejido y se cultivó enagar Skirrow y agar selectivo para Helicobacter; una placa de cada medio se incubó a 37 °C en microaerofilia entre 48 horas y 10 días. La positividad del cultivo se realizó por observación de la morfología colonial y la bacteria se identificó por análisis microscópico al fresco, tinción de Gram y pruebas bioquímicas (catalasa, ureasa y oxidasa). Resultados: Se incluyó a 44 pacientes (edad: 50.6 ± 10.0, 54.5% masculinos). Se recuperó Helicobacter pylori en biopsias de 27 pacientes (61.4% de éxito). La recuperación de la bacteria fue similar en el medio Skirrow y en el selectivo para Helicobacter. El porcentaje de éxito de recuperación semanal aumentó durante el estudio hasta alcanzar un éxito del 100% en la semana 11. Se comparó el cultivo con la ureasa rápida en 27 pacientes y la concordancia entre ambos métodos fue de un coeficiente kappa de Cohen de 0.48. El cultivo detectó la bacteria en un 56% de los pacientes, la ureasa rápida en un 37% y la combinación de ambas técnicas permitió la detección en un 60%. El diagnóstico endoscópico más frecuente en los pacientes con cultivo positivo fue la gastritis eritematosa y gastritis crónica superficial y el diagnóstico histopatológico predominante fue gastritis crónica con atrofia gástrica. El diagnóstico por cultivo coincidió con la detección por azul de toluidina en un 80.4% de los casos. Conclusiones: Se puede implementar el cultivo de Helicobacter pylori en Costa Rica. Este estudio tuvo un porcentaje de recuperación de la bacteria de 61.4%. La combinación del método de cultivo con la prueba de ureasa rápida y la detección histológica contribuye a un diagnóstico certero y oportuno. Recomendamos que, con base en protocolos descritos en esta investigación, cada laboratorio estandarice las condiciones que le permitan un buen porcentaje de recuperación y una implementación adaptada a sus actividades de rutina.

Aim: To document the recent experiences on the implementation of sampling and culturing Helicobacter pylori in Costa Rica, to compare it with other diagnostic methods: rapid urease test and histopathology and to describe the diagnoses associated with the obtained isolates. Methods: Descriptive research involving patients who visited the digestive endoscopy department of the Clínica Bíblica hospital in San José, Costa Rica between February and July of 2019 for gastroscopy. Gastric biopsies were obtained and histopathological analysis, rapid urease test, and bacteriological culture for Helicobacter pylori were performed. For culture techniques, the sample was transported in an in-house semi-solid medium. Biopsy fragments were macerated and plated on Skirrow agar and Helicobacterselective in-house agar, and incubated in microaerophilic atmosphere for 48 hours to 10 days. Culture positivity was determined by observation of the colonial morphology and microscopic observation; Gram staining and biochemical tests (urease, catalase, and oxidase) were used for bacterial identification. Results: 44 patients (mean aged 50.6 ± 10.0 years old, 54.5% male) were included in the study. Helicobacter pylori was recovered in biopsies from 27 patients (61.4% success rate). Bacterial growth was similar regardless the culture medium, but the physiological state of the bacteria was better in the Helicobacter-selective agar than in Skirrow. The weekly recovery rate increased to reach a 100% recovery plateau on week 11. Culture was compared with the rapid urease test in 27 patients, and the concordance between both methods using Cohen's kappa coefficient was 0.48. Whilst the culture detected Helicobacter pylori in 56% of the patients, and the rapid urease test in 37%, the combination of both allowed a 60% rate. The most frequent endoscopic diagnosis in patients with positive cultures were erythematous gastritis and chronic superficial gastritis, and the predominant histopathological diagnosis was chronic atrophic gastritis. Culture-based diagnosis was consistent with the histopathology detection of Helicobacter pylori in 80.4% of the cases. Conclusions: The implementation of H. pylori culture in Costa Rica is possible. This study had a 61.4% recovery rate. The combination of culture with rapid urease test and histopathology increases the probability of an accurate and timely diagnosis. We recommend that, based on previously described protocols such as ours, each laboratory adjusts the conditions to allow a good recovery rate and implement H. pylori diagnostic methods most suitable to their routine activities.

Wooden sticks for plaque streaking and microbiological inoculation might be more cost- effective, but is its large scale use feasible? Quality control methods and proof of concept / Métodos de controle de qualidade e prova de conceito para a utilização de palitos de madeira em microbiologia podem ser mais econômicas, mas seu uso em larga escala é viável? Método de controle de qualidade e prova de conceito

The loop is a material classically used in the laboratory for the purpose of plate streaking and handling biological materials. However, metal loops techniques might be time consuming, considering the amount of time spent to guarantee its cooling process through each inoculation. Furthermore, plastic loops may also represent environmental issues during its production and discard process and can also represent higher costs for the laboratory. Thus, in situations of limited resources, even the simplest materials can be restricted due to logistical and budgetary issues, especially in developing countries. Inspired by demands like these, facing an occasional shortage of supply of laboratory plastic handles, we hereby present a quality control for sterilization methods and cost-effectiveness studies towards the use of wooden sticks in a Latin American country and we discuss the possibility of the large-scale use of this technique.

A alça calibrada é um material usado classicamente em laboratório para fins de inoculação em placas e manuseio de materiais biológicos. No entanto, as técnicas de alças metálicas podem consumir muito tempo, considerando a quantidade de tempo gasto para garantir seu processo de resfriamento a cada inoculação. Além disso, alças de plástico também podem representar questões ambientais durante o processo de produção e descarte e também podem representar custos mais altos para o laboratório. Assim, em situações de recursos limitados, até os materiais mais simples podem ser restringidos devido a questões logísticas e orçamentárias, especialmente nos países em desenvolvimento. Inspirados por demandas como essas, diante de uma escassez ocasional de suprimentos de alças de plástico de laboratório, apresentamos um controle de qualidade para métodos de esterilização e estudos de custo-efetividade para o uso de varas de madeira em um país latino-americano e discutimos a possibilidade de grande uso em escala dessa técnica.

Wooden sticks for plaque streaking and microbiological inoculation might be more cost- effective, but is its large scale use feasible? Quality control methods and proof of concept / Métodos de controle de qualidade e prova de conceito para a utilização de palitos de madeira em microbiologia podem ser mais econômicas, mas seu uso em larga escala é viável? Método de controle de qualidade e prova de conceito

The loop is a material classically used in the laboratory for the purpose of plate streaking and handling biological materials. However, metal loops techniques might be time consuming, considering the amount of time spent to guarantee its cooling process through each inoculation. Furthermore, plastic loops may also represent environmental issues during its production and discard process and can also represent higher costs for the laboratory. Thus, in situations of limited resources, even the simplest materials can be restricted due to logistical and budgetary issues, especially in developing countries. Inspired by demands like these, facing an occasional shortage of supply of laboratory plastic handles, we hereby present a quality control for sterilization methods and cost-effectiveness studies towards the use of wooden sticks in a Latin American country and we discuss the possibility of the large-scale use of this technique.

A alça calibrada é um material usado classicamente em laboratório para fins de inoculação em placas e manuseio de materiais biológicos. No entanto, as técnicas de alças metálicas podem consumir muito tempo, considerando a quantidade de tempo gasto para garantir seu processo de resfriamento a cada inoculação. Além disso, alças de plástico também podem representar questões ambientais durante o processo de produção e descarte e também podem representar custos mais altos para o laboratório. Assim, em situações de recursos limitados, até os materiais mais simples podem ser restringidos devido a questões logísticas e orçamentárias, especialmente nos países em desenvolvimento. Inspirados por demandas como essas, diante de uma escassez ocasional de suprimentos de alças de plástico de laboratório, apresentamos um controle de qualidade para métodos de esterilização e estudos de custo-efetividade para o uso de varas de madeira em um país latino-americano e discutimos a possibilidade de grande uso em escala dessa técnica.

Wooden sticks for plaque streaking and microbiological inoculation might be more cost- effective, but is its large scale use feasible? Quality control methods and proof of concept

Abstract The loop is a material classically used in the laboratory for the purpose of plate streaking and handling biological materials. However, metal loops techniques might be time consuming, considering the amount of time spent to guarantee its cooling process through each inoculation. Furthermore, plastic loops may also represent environmental issues during its production and discard process and can also represent higher costs for the laboratory. Thus, in situations of limited resources, even the simplest materials can be restricted due to logistical and budgetary issues, especially in developing countries. Inspired by demands like these, facing an occasional shortage of supply of laboratory plastic handles, we hereby present a quality control for sterilization methods and cost-effectiveness studies towards the use of wooden sticks in a Latin American country and we discuss the possibility of the large-scale use of this technique.

Resumo A alça calibrada é um material usado classicamente em laboratório para fins de inoculação em placas e manuseio de materiais biológicos. No entanto, as técnicas de alças metálicas podem consumir muito tempo, considerando a quantidade de tempo gasto para garantir seu processo de resfriamento a cada inoculação. Além disso, alças de plástico também podem representar questões ambientais durante o processo de produção e descarte e também podem representar custos mais altos para o laboratório. Assim, em situações de recursos limitados, até os materiais mais simples podem ser restringidos devido a questões logísticas e orçamentárias, especialmente nos países em desenvolvimento. Inspirados por demandas como essas, diante de uma escassez ocasional de suprimentos de alças de plástico de laboratório, apresentamos um controle de qualidade para métodos de esterilização e estudos de custo-efetividade para o uso de varas de madeira em um país latino-americano e discutimos a possibilidade de grande uso em escala dessa técnica.

Caracterización de la tuberculosis en pacientes de la provincia Guantánamo, Cuba / Characterization of tuberculosis in patients from the Guantánamo province, Cuba

RESUMEN Introducción: La lucha contra la tuberculosis es una responsabilidad social y profesional que requiere de su caracterización, la que no se ha realizado en Guantánamo en la última década. Objetivo: Caracterizar la tuberculosis en pacientes de la provincia Guantánamo durante el periodo comprendido entre 2012 y 2019. Método: El universo se constituyó por el total de pacientes diagnosticados (n=136). Se estudiaron las siguientes variables: edad, sexo, localización de la enfermedad, resultados de la baciloscopía, categoría al egreso y grupos de riesgo de tuberculosis. La información se obtuvo mediante los registros de enfermedades de declaración obligatoria cada año, y las encuestas epidemiológicas de los controles de focos realizados, y se resumió en números absolutos y porcentajes. Resultados: En el 80,1 % de los casos la tuberculosis se localizó en los pulmones, y fue más común el diagnóstico de pacientes con baciloscopía positiva (63,2 %). El 76,7 % de los pacientes con baciloscopía positiva fueron masculinos. Los grupos de riesgos para tuberculosis más usuales fueron: fumadores (26,4 %), inmunodeprimidos (21,6 %) y el alcoholismo (19,1 %). Conclusiones: En la provincia Guantánamo prevalece la tuberculosis de localización pulmonar y los pacientes con bacteriología positiva. Los afectados sobre todo son hombres, tienen edad entre 45 a 54 años y son de reciente diagnóstico. La enfermedad incide más en aquellos con antecedente de ser fumadores, inmunodeprimidos y los alcohólicos.

ABSTRACT Introduction: The fight against tuberculosis is a social and professional responsibility, which requires its characterization, which has not been carried out in Guantánamo in the last decade. Objective: To characterize tuberculosis in patients in the Guantánamo province during the period between 2012 and 2019. Method: The universe was made up of the total number of diagnosed patients (n = 136). The following variables were studied: age, sex, location of the disease, smear results, category at discharge, and tuberculosis risk groups. The information was obtained through the notifiable disease registries for each year and the epidemiological surveys of the outbreak controls carried out, and was summarized in absolute numbers and percentages. Results: In 80.1% of cases, tuberculosis is in the lungs, and the diagnosis of patients with positive smear microscopy (63.2%) is more common. 76.7% of smear-positive patients are male. The most common risk groups for tuberculosis are: smokers (26.4%), immunosuppressed (21.6%) and alcoholism (19.1%). Conclusions: In Guantánamo province, pulmonary localization tuberculosis and patients with positive bacteriology prevail. Those affected are mainly men, they are between 45 and 54 years old and have recently been diagnosed. The disease affects more in those with a history of being smokers, immunosuppressed and alcoholics.

Prevalência de vaginoses bacterianas em pacientes que realizaram bacterioscopia de secreção vaginal / Prevalence of bacterial vaginosis in patients who underwent bacterioscopy of vaginal secretion

Introdução: a microbiota da região genital feminina pode sofrer alterações ocasionando patologias, como as vaginoses bacterianas (VB). A VB tem como principal sintoma o corrimento genital, de coloração branca ou acinzentada com odor desagradável. Devido as grandes complicações que essa doença ocasiona, como infertilidade, abortos e o aumento do risco de adquirir HIV, ela é considerada um grave problema de saúde pública. Objetivo: verificar a prevalência de vaginoses bacterianas em pacientes que realizaram bacterioscopia de secreção vaginal em um laboratório particular de Aracaju, em Sergipe. Metodologia: trata-se de um estudo do tipo documental, retrospectivo e transversal, com base na análise dos protocolos de identificação das mulheres que realizaram bacterioscopia de secreção vaginal, no período de janeiro a dezembro de 2017. Resultados: foram analisados 434 protocolos, sendo que 80 (18,4%) das amostras foram positivas para VB e 354 (81,6%) negativas. Nas positivas, o agente infeccioso mais prevalente foi a Candida sp. (56,3%), depois Gardnerella vaginallis (35%) e ainda houve coinfeccção (8,7%). Na faixa etária, a prevalência maior foi observada no grupo de menores que 20 anos (9,66%). Dentre os sintomas, o corrimento foi mais frequente (28,75%). No estudo foi descrito utilização do DIU pelas mulheres (1,25%). Conclusão: nota-se um problema de saúde da mulher referente as VB, o qual deve ter um maior controle e regressão da sua prevalência. Faz-se necessário investimentos em políticas públicas, na saúde, voltadas a avaliação dos comportamentos de riscos, a fim de promover uma prevenção das infecções vaginais, visando a redução dos agravos

Introduction: the microbiota of the female genital area can change causing pathologies, such as bacterial vaginosis (BV). The main symptom of BV is vaginal discharge, of white or grayish color with an unpleasant odor. Due to the great complications that this disease causes, such as infertility, abortion and the increased risk of acquiring HIV, it is considered a serious public health problem. Objective: to verify the prevalence of bacterial vaginosis in patients who underwent bacterioscopy of vaginal secretion in a particular laboratory here in Aracaju, Sergipe. Methodology: This is a documentary, retrospective and cross-sectional study, based on the analysis of identification records of women who underwent bacterioscopy of vaginal secretion, from January to December, 2017. Results: 434 samples were analyzed, and 80 (18.4%) of them were positive for BV and 354 (81.6%) negative. In the positive, the most prevalent infectious agent was Candida sp. (56.3%), followed by Gardnerella vaginallis (35%) and coinfection (8.7%). About the age of the group, the highest prevalence was observed in the group by younger than 20 years (9.66%). Among the symptoms, discharge was the most frequente (28.75%). In the study, IUD use by women was described (1.25%). Conclusion: women health problems related to BV are noted, which should have a greater control and regression of their prevalence. It is necessary to invest in health public policy, directed to evaluation of risk behaviors, in order to promote prevention of vaginal infections, aiming at the reduction of diseases.

De Bombaim ao Rio de Janeiro: circulação de conhecimento e a criação do Laboratório de Manguinhos, 1894-1902 / From Bombay to Rio de Janeiro: the circulation of knowledge and the establishment of the Manguinhos laboratory, 1894-1902

Resumo Para se compreender a fundação, em 1900, e os primeiros trabalhos científicos do Instituto Soroterápico Federal, é necessário analisar a circulação de conhecimento e a disputa internacional envolvendo os soros antipestosos e as vacinas antipestosas. O artigo discute a criação do primeiro soro antipestoso, em Paris, e os testes realizados a partir de 1897 na Índia. Paralelamente, examina a invenção da vacina antipestosa na mesma época em Bombaim e a oposição construída entre ela e o soro antipestoso francês. Em seguida, observa os diferentes caminhos pelos quais esses objetos chegaram ao Brasil e como questões locais se conectaram à disputa científica internacional e justificaram, no Rio de Janeiro, reconfigurações em torno desses dois objetos.

Abstract In order to understand the 1900 establishment of the Federal Serum Therapy Institute of Manguinhos and its earliest scientific work, we must analyze the circulation of knowledge and international disputes surrounding antiplague serums and vaccines. This article discusses the development of the first antiplague serum, in Paris, and the trials conducted in India, which started in 1897. It also examines the invention of an antiplague vaccine in Bombay around the same time and the ensuing controversy involving it and the French serum. The article then explores the pathways by which these objects reached Brazil and also looks at how local issues there meshed with the international scientific dispute, ultimately justifying reconfigurations of the two objects in Rio de Janeiro.

Gerencia de diagnóstico y vigilancia epidemiológica del Instituto Nacional de Higiene "Rafael Rangel": Una década de avances y logros / Diagnostic and epidemiological surveillance management The National Institute of Hygiene "Rafael Rangel": A decade of advances and achievements

Buscando en los registros de las principales actividades de la Gerencia de Diagnóstico y Vigilancia Epidemiológica ha sido difícil elegir entre tantas vivencias, aquellos elementos que marcaron pauta durante la década 2008 ­ 2018. No obstante, es de resaltar que los desafíos afrontados ante la aparición de brotes, epidemias y la primera pandemia del siglo XXI, trajeron consigo un cúmulo de experiencias que se presentan en este artículo. Como centro nacional de referencia en las áreas de Bacteriología, Micología y Virología, continuamos aportando soluciones a la salud pública nacional mediante la actualización profesional de nuestro personal y la formación de la generación de relevo, en la que participan profesionales de excelencia, altamente especializados y sensibilizados con la problemática y los requerimientos de nuestra población. Asimismo, a través de la coordinación, supervisión y evaluación de la Red de laboratorios de salud pública, se contribuye con el fortalecimiento del diagnóstico de enfermedades transmisibles y vigilancia epidemiológica en el país. El trabajo realizado en estos diez años ha sido excelente, crucial y prioritario para enfrentar las emergencias. Debemos seguir trabajando en dos aspectos claves: 1. Mayor integración del laboratorio con el componente epidemiológico y clínico del país para ser más útiles al sistema de salud, y 2. Consolidar la creación del edificio sede del Centro de Diagnóstico de Enfermedades Transmisibles del Instituto Nacional de Higiene "Rafael Rangel" (INHRR), proyecto en el que estamos trabajando con la asesoría de la OPS/OMS.

Looking at the records of the main activities of the Diagnostic and Epidemiological Surveillance Management, it has been difficult to choose between many experiences, those elements that set the standard during the 2008 ­ 2018 decade. However, it is noteworthy that the challenges faced with the emergence of outbreaks, epidemics and the first pandemic of the 21st century, brought with it a wealth of experiences that are presented in this article. As a national reference center in Bacteriology, Mycology and Virology areas, we continue to provide solutions to public health through the professional updating of our staff and formation of the relief generation, in which participate professionals of excellence, highly specialized and sensitized with the problems and requirements of our population. Likewise, through the coordination, supervision and evaluation of the public health laboratories network, it contributes to the strengthening of the communicable diseases diagnosis and epidemiological surveillance in the country. The work done in these ten years has been excellent, crucial and priority to face emergencies. We must continue working on two key aspects: 1. Greater laboratory integration with the epidemiological and clinical component of the country to be more useful to the health system, and 2. Consolidate headquarters building creation of the National Institute of Hygiene "Rafael Rangel" (INHRR) Diagnostic Center for Communicable Diseases, project in which we are working with the PAHO / WHO advice.

Aerobic bacteria in oral cavity of Lancehead snakes (Bothrops atrox) with stomatitis / Bactérias aeróbicas da cavidade oral de jararaca-do-norte (Bothrops atrox) com estomatite

Stomatitis is a common disease found on snake farms, and Gram-negative bacilli are the main etiological agents that play an important role as secondary sources of viral or parasitic infections. The purpose of this work was to identify the aerobic bacteria in the oral cavity of Bothrops atrox with stomatitis. Samples for microbiological examination were collected from 12 snakes bred on a commercial snake farm for venom extraction. Samples of the secretion in the oral cavity of each serpent presenting stomatitis were collected from fang sheath, using a cotton swab with sterile alginate. The samples were incubated and cultured on Petri dishes containing blood agar and XLD agar using the agar depletion technique. Bacterial growth occurred in all analyzed samples collected from the oral cavity of Bothrops atrox with stomatitis, and some of the samples contained more than one microorganism. The following Gram-negative bacteria were isolated: Escherichia coli (26.31%), Citrobacter spp. (21.05%), Proteus spp. (15.78%) and Salmonella spp. (10.52%). The only Gram-positive bacterium that was isolated was Staphylococcus spp., which was present in 26.31% of the analyzed samples.

A estomatite é uma das doenças mais frequentes em criatórios comerciais de serpentes, sendo os bacilos Gram-negativos os principais agentes etiológicos com importante papel, como fontes secundárias, nas infecções virais ou parasitárias. O objetivo do presente trabalho foi analisar as bactérias aeróbicas presentes na cavidade oral em serpentes da espécie Bothrops atrox. Utilizaram-se 12 amostras colhidas com auxílio de swab estéril na região da bainha da presa, em serpentes que apresentaram estomatite, em um criatório comercial. As amostras foram cultivadas em Ágar-sangue e Ágar XLD. Em todas as amostras analisadas, houve crescimento de, pelo menos, um microrganismo. As bactérias Gram-negativas isoladas foram Escherichia coli (26,31%), Citrobacter spp. (21,05%), Proteus spp. (15,78%) e Salmonella spp. (10,52%). A única bactéria Gram-positiva isolada foi a Staphylococcus spp., presente em 26,31% das amostras analisadas.

O micróbio protagonista: notas sobre a divulgação da bacteriologia na Gazeta Médica da Bahia, século XIX / The protagonist microbe: notes on the communication of bacteriology in the Gazeta Médica da Bahia journal, nineteenth century

Resumo A teoria dos germes, decorrente, em especial, dos trabalhos de Louis Pasteur e Robert Koch, fez estremecer as bases do saber médico a partir da segunda metade do período oitocentista e promoveu uma revolução na “arte de curar”. A busca por micróbios específicos para as doenças norteou as investigações de pesquisadores convertidos aos dogmas pasteurianos. Este trabalho procura mostrar, em linhas gerais, o papel desempenhado pela Gazeta Médica da Bahia no processo de divulgação da bacteriologia junto às comunidades médicas baiana e nacional. O artigo apresenta alguns trabalhos e reflexões de colaboradores do periódico e destaca algumas controvérsias que ajudaram a traçar um panorama da difusão da teoria dos germes pelo Brasil ao longo do século XIX.

Abstract Germ theory, derived particularly from the work of Louis Pasteur and Robert Koch, shook the foundations of medical knowledge in the second half of the nineteenth century and triggered a revolution in the “art of healing.” The search for specific microbes for diseases guided the investigations of the researchers converted to the Pasteurian tenets. This paper aims to show what role the Gazeta Médica da Bahia journal played in spreading knowledge about bacteriology to the medical communities in Bahia and throughout Brazil. Some works and reflections by the newspaper’s authors at the time are presented, as are some of the controversies that help depict the way germ theory was divulged in Brazil throughout the nineteenth century.

Phenotypic and molecular detection of Salmonella sp. on growing, rearing and production phases in a commercial group of laying hens / Detecção fenotípica e molecular de Salmonella sp. nas fases de cria, recria e produção em lote de poedeiras comerciais

This present study was developed with the objective of detect Salmonella sp. by conventional bacteriology and qPCR techniques in samples of flooring material from transport crates (meconium); raising environment (swab of cages and drinking fountains); cloacal swab; food and insects from growing, rearing and production phases in a commercial group of laying hens. A total of 864 samples were collected, among whom 248 originated from growing, 392 from rearing and 224 from production phase. Among the 864 samples, 2,8% where positives in bacteriologic technique and 15.3% in qPCR. Contamination was higher in growing and rearing phases and declined in production phase. Twenty four isolations of Salmonella where typified as Salmonella Agona (41.7%), Salmonella Livingstone (33.3%), Salmonella Cerro (16.7%), Salmonella Senftenberg (4.2%) and Salmonella Schwarzengrund (4.2%). During growing phase Salmonella Livingstone was identified. These findings suggest vertical contamination in the group. During rearing and production phases, isolated materials belong to serovars Agona, Cerro, Senftenberg and Schwarzengrund, pointing to horizontal contamination. It is possible to conclude that both vertical and horizontal contaminations are important during the cycle of commercial egg production and contamination in rearing phase is higher than in growing and production phases.(AU)

O presente estudo foi desenvolvido com objetivo de detectar Salmonella sp. pelas técnicas de bacteriologia convencional e PCR em tempo real em amostras de forros de caixas de transporte (mecônio), de ambientes de criação (suabes de gaiola e de bebedouro), suabes de cloaca, ração e insetos oriundos das fases de cria, recria e produção de um lote de poedeiras comerciais. Foram coletadas 864 amostras das quais 248 foram originadas da cria, 392 da recria e 224 da produção. Das 864 amostras 2,8% foram positivas na técnica bacteriológica e 15,3% no PCR em tempo real. A contaminação aumentou da fase de cria para a recria e declinou na fase de produção. Vinte e quatro isolados de Salmonella foram tipificados como Salmonella Agona (41,7%), Salmonella Livingstone (33,3%), Salmonella Cerro (16,7%), Salmonella Senftenberg (4,2%) e Salmonella Schwarzengrund (4,2%). Na fase de cria identificou-se Salmonella Livingstone. Esses achados sugerem a contaminação vertical do lote. Nas fases de recria e produção os isolados pertenceram aos sorovares Agona, Cerro, Senftenberg e Schwarzengrund apontando para a contaminação horizontal. Pode-se concluir com este estudo que tanto a contaminação vertical como a horizontal são importantes no ciclo de produção de ovos comerciais e que a contaminação na fase de recria é maior que na fase de cria e de produção.(AU)

Identificação de Mycobacterium bovis em carcaças de bovinos abatidos no estado da Bahia, Brasil, por métodos bacteriológico e molecular / Identification of Mycobacterium bovis in carcasses of cattle slaughtered in Bahia state, Brazil by bacteriological and molecular methods

O objetivo do presente trabalho foi utilizar métodos bacteriológicos e moleculares para a identificação do Mycobacterium bovis em lesões observadas em carcaças de bovinos durante a inspeção post mortem de rotina em matadouros-frigoríficos com serviço de inspeção oficial. Foram acompanhados o abate e a inspeção de 825.394 bovinos, sadios, ao exame ante mortem pelo serviço de inspeção oficial em 10 matadouros-frigoríficos do estado da Bahia, entre abril de 2009 e abril de 2012. Cento e oitenta bovinos apresentaram lesões sugestivas de tuberculose e outras linfadenites, as quais foram avaliadas quanto à presença de Mycobacterium bovis por exame bacteriológico e pela PCR multiplex. A maioria das lesões estava localizada em linfonodos do trato respiratório e 71% eram provenientes de bovinos machos com até 32 meses de idade. No isolamento bacteriano, 13,9% (25/180) das amostras apresentavam colônias pequenas, de superfície granular e de coloração creme-amareladas, em meio de cultura Stonebrink-Leslie, e o crescimento médio foi de 34 dias. Todos os esfregaços dos isolados evidenciaram BAAR, e, pela PCR multiplex, 56% (14/25) dos isolados foram identificados como M. bovis. A associação entre exame post mortem, bacteriológico e PCR multiplex permitiu a identificação do agente de forma rápida e em regiões com status sanitário de baixa prevalência, demonstrando ser importante para a detecção dos focos de tuberculose bovina e o auxílio nos programas de controle e erradicação da tuberculose...

The aim of the present study was to perform bacteriological and molecular methods for identification of Mycobacterium bovis in lesions derived from bovine carcasses detected during routine post-mortem examination in officially inspected slaughterhouses. We checked the slaughter and inspection of 825,394 bovines, health upon ante-mortem examination, by the official service in 10 slaughterhouses of Bahia state from April, 2009 to April 2012. Lesions suggestive of tuberculosis were collected from 180 bovines and further evaluated by bacteriology and multiplex PCR. The majority of lesions were located in the respiratory tract lymph nodes and 71% were from male bovines up to 32 months old. 13.9% of samples presented small, granular and creamy-yellowish colonies after being cultured in Stonebrink-Leslie with an average growth time of 34 days. All smears from the isolated samples were Acid Fast Bacilli (AFB) and among them 56% were identified by mPCR as M. bovis. Thus, the association between post-mortem examination, culture and multiplex PCR allowed the bacillus identification in a reduced time and in regions of low prevalence, pointing out its importance for bovine tuberculosis detection and as a supportive tool for the tuberculosis control and eradication program...

Estudo da ocorrência de infecção hospitalar em cães e gatos em um centro cirúrgico veterinário universitário / Study of nosocomial infections in dogs and cats in an academic veterinary surgical center

Infecção hospitalar ou nosocomial é aquela adquirida durante a hospitalização do paciente, e que pode ser relacionada os procedimentos hospitalares invasivos realizados durante o internamento. O presente trabalho teve como objetivos estudar a ocorrência de infecção hospitalar em animais atendidos em um Centro Cirúrgico Veterinário Universitário de Pequenos Animais submetidos a procedimentos cirúrgicos e/ou invasivos; discutir as possíveis causas de infecção, detectar as bactérias presentes quando possível e verificar a sensibilidade antimicrobiana destes agentes. O trabalho foi desenvolvido através do acompanhamento diário de 131 animais internados neste setor e busca ativa de casos de infecção hospitalar. Em 104 animais (91 cães e 13 felinos), foram realizados 113 procedimentos cirúrgicos e em 27 animais condutas não cirúrgicas tais como acompanhamento de parto e pós-parto, desobstrução uretral e colocação de talas. Todos os animais foram submetidos à colocação de cateter para fluidoterapia e/ou aplicação de medicamentos e/ou anestésicos em algum momento durante o internamento. O índice de infecção do sítio cirúrgico foi de 7,96% sendo 4,54% nas cirurgias limpas, 4,25% nas cirurgias limpa-contaminadas, 10,53% nas cirurgias contaminadas e 16% nas cirurgias infectadas. A taxa de infecção hospitalar não cirúrgica no paciente cirúrgico foi de 2,88% e 3,7% no paciente não cirúrgico. Foram cultivados sete isolados bacterianos, sendo Pseudomonas sp. (3), Streptococcus sp. (2), Acinetobacter sp. (1) e bacilo Gram negativo (1), constatando-se multirresistência bacteriana alta em todos os isolados. A duração da cirurgia e os tempos de internamento pré e pós-operatório não influenciaram na ocorrência de infecção hospitalar, mas os fatores que provavelmente colaboraram para a ocorrência de infecções no presente trabalho foram a própria gravidade da doença que motivou o tratamento, o tipo de procedimento realizado e a gravidade das lesões concomitantes.

Hospital or nosocomial infections are infections acquired during patient hospitalization, and that can be related to surgical and invasive procedures performed during the hospital admission. The present study aimed to investigate the occurrence of nosocomial infection in animals treated at a Veterinary Surgical Center of Small Animals, submitted to surgical or invasive procedures, to discuss the possible causes of infection, to detect the bacteria present when possible, and to verify the antimicrobial sensitivity of these agents. The study was developed through daily monitoring of 131 animals admitted in this surgical center and doing active surveillance of cases of nosocomial infection. In 104 animals (91 dogs and 13 cats), 113 surgical procedures were performed, and in 27 animals were performed non-surgical procedures such monitoring of delivery and postpartum, urethral catheterization and placement of splints. All animals were submitted to catheter placement for fluid therapy and application of medications and/or anesthetic at some point during hospitalization. The rate of surgical site infection was 7.96%, and by categories was 4.54% in clean surgeries, 4.25% in clean-contaminated surgeries, 10.53% in contaminated surgeries, and 16% in infected surgeries. The rate of non-surgical nosocomial infection in surgical patients was 2.88% and in the non-surgical patient was 3.7%. Bacteria were cultured as follows: Pseudomonas sp. (3), Streptococcus sp. (2), Acinetobacter sp. (1) and Gram negative bacilli (1), and high bacterial multidrug resistance were observed in all isolates. The duration of surgery and pre and postoperative time of hospitalization did not affect the occurrence of nosocomial infection, but factors that probably contributed to the occurrence of infections in this study were the severity of the condition responsible for the treatment, the kind of procedure performed and the severity of lesions.

Calidad bacteriológica de aguas en piscinas públicas y privadas de la ciudad de Cumaná, estado Sucre, Venezuela / Bacteriological quality of water of public and private pools of the city of Cumaná, Sucre state, Venezuela

Para evaluar la calidad bacteriológica de aguas de piscinas en la ciudad de Cumaná, estado Sucre, Venezuela, se recolectaron muestras de agua en 1 piscina pública y 4 privadas, codificadas de la A a la E; se tomaron 2 muestras semanales durante 2 meses, antes y después de la limpieza. Se determinó pH, temperatura y cloro residual; los aerobios mesófilos por contaje en placas, el Número Más Probable (NMP) para coliformes totales (CT) y fecales (CF) e identificación bacteriana por métodos convencionales. El pH osciló entre 6,8 y 7,3, la temperatura de 29 a 31ºC y el cloro residual de 0,3 a 0,5 mg/L. El contaje más elevado de bacterias mesófilas se obtuvo en B con 6x10 2 UFC/mL, y el más bajo en C con 3x10 2 UFC/mL. En relación al NMP, antes de la limpieza, el valor más alto se obtuvo en D con 2,8x10 3 CT/100 ml; E mostró el valor más alto de CF /100 ml. Después de la limpieza B mostró el valor más alto de CT ubicándose en 9,3mLx10 2 y los valores más alto de CF para D y E en 3x10 2 . Los valores de CF antes y después de la limpieza superan lo establecido por la normativa Venezolana (0 NMP/100mL). Estadísticamente, no se evidenciaron diferencias significativas entre las piscinas para CT y CF antes y después de la limpieza. Las bacterias Gramnegativas predominaron, en E (84,21%) y B (71,92%), Klebsiella pneumoniae, Escherichia coli y Pseudomonas aeruginosa. A presentó mayor número de aislados Grampositivos (44,44%), identificándose Staphylococcus epidermidis y Enterococcus faecalis. Estos resultados indican una constante contaminación bacteriana y riesgo sanitario.

To evaluate the bacteriological quality of water pools in the city of Cumaná, Sucre state, Venezuela, water samples were collected in 1 public and 4 private pools, coded A to E, respectively, 2 samples were taken weekly for 2 months before and after a pool cleaning process. We determined pH, temperature and residual chlorine, aerobic mesophilic for total plate count, the Most Probable Number (MPN) for total coliforms (TC) and fecal (FC) and bacterial identification by conventional methods. The pH in the samples ranged between 6.8 and 7.3, temperature of 29 to 31ºC and chlorine residual of 0.3 to 0.5 mg/L The highest count of aerobic mesophilic bacteria was obtained in B with 6x10 2 . CFU/mL. In relation to the MPN, before cleaning, the CT highest value was obtained in D with 2.8 x10 3 and CT/100mL, E showed the highest CF value with 6x10 2 CF/100mL. After cleaning, the results for B indicated the CT highest values, 9.3 x10 2 CT/100mL, and in D and E the results had the CF highest values, 3x10 2 CF/100 mL. CF values in the samples before and after cleaning exceed the standards established by Venezuela (0 NMP/100mL). Statistically, no significant differences were found between pools for CT and CF before and after cleaning. Gram-negative bacteria predominated, being more frequent in E (84.21%) and B (71.92%), mainly, Klebsiella pneumoniae, Escherichia coli and Pseudomonas aeruginosa. Sample A had more isolated Gram-positive (44.44%), identified as Staphylococcus epidermidis and Enterococcus faecalis. These results indicate a constant bacterial contamination and health risk.

Laboratorial diagnosis of animal leptospirosis

Leptospirosis is the most widespread zoonosis in the world, but it is more prevalent in tropical than in temperate regions. Its etiologic agent, pathogenic Leptospira sp., penetrates the animal skin through cuts or abrasions, external mucosa (such as the conjunctiva). Clinical signs are variable and unspecific, particularly in animals, mainly in chronic infections, which are often asymptomatic. For an effective control of an infectious disease it is essential a diagnostic test that have high sensitivity, specificity and practicality. In leptospirosis, misdiagnosis is frequent, what can lead to erroneous treatment in cases of acute disease and to the maintenance of the agent in herds, what could determine considering losses. Noteworthy that the natural course of the disease influences directly on which diagnostic test should be chosen, as well as the type of clinical sample that should be collected. The laboratory diagnosis of leptospirosis is challenging, where there is not a highly sensitive and specific test for a reliable diagnosis in animals. This review presents advantages and disadvantages of the current laboratory methods for animal leptospirosis diagnosis considering the differences between affected species and the disease pathogenicity.

Evaluación de la terapia mecánica periodontal en bolsas profundas: respuesta clínica y bacteriológica / Evaluation of periodontal mechanical therapy in deep pockets: Clinical and bacteriological response

Objetivos: Evaluar la composición microbiológica y los parámetros clínicos de bolsas periodontales >5 mm de profundidad al inicio, 1 semana, 3 y 12 meses post raspado y alisado radicular. Materiales y Métodos: Se tomaron registros clínicos y muestras de placa subgingival de 44 sitios de pacientes con diagnóstico de periodontitis crónica. Se identificaron por técnica de Reacción en Cadena de la Polimerasa (PCR) patógenos putativos periodontales: Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Treponema denticola (Td), Tannerella forsythia (Tf) y Prevotella intermedia (Pi). Los pacientes recibieron terapia mecánica periodontal y fueron reevaluados a los 7 días, 3 y 12 meses. Resultados: Luego del tratamiento, todos los parámetros clínicos (Placa Bacteriana, Hemorragia, Supuración, Profundidad al Sondaje y Nivel de Inserción Clínica) se redujeron significativamente y los valores obtenidos se mantuvieron hasta los 12 meses. Al inicio, las especies bacterianas prevalentes fueron Pg, presente en 66 por ciento de los sitios, Tf (55 por ciento) y Td (41 por ciento). Los sitios más profundos se relacionaron con las asociaciones Tf-Td (6.8 mm) y Tf-Td-Pi (7 mm). Post terapia, el número de sitios positivos para Td, Tf y Pg se redujo significativamente. Conclusiones: El raspado y alisado radicular mejoró significativamente los parámetros clínicos y redujo la prevalencia de los patógenos periodontales Pg, Tf y Td en bolsas periodontales profundas. Los resultados obtenidos se mantuvieron hasta los 12 meses. No se detectaron mayores pérdidas de inserción clínica en el 86 por ciento de los sitios a 3 meses y en 79 por ciento a los 12 meses. Los sitios en los que el tratamiento no fue efectivo en la eliminación de patógenos a los 12 meses desarrollaron mayores profundidades de sondaje.

Objectives: To evaluate the microbial composition and clinical parameters of periodontal pockets with probing depth >5 mm at baseline, 1 week, 3 and 12 months after scaling and root planning. Methods: Clinical parameters were measured and bacterial samples were collected from 44 sites in 11 patients with chronic periodontitis. By means of Polymerase Chain Reaction (PCR) the presence of Aggregatibacter actinomycetemcomitans (Aa), Porphyromonas gingivalis (Pg), Treponema denticola (Td), Tannerella forsythia (Tf) and Prevotella intermedia (Pi) was estimated. The patients received mechanical periodontal therapy and were evaluated after 1 week, 3 months and 12 months. Results: After treatment, all clinical parameters (Plaque, Bleeding on Probing, Supuration, Probing Pocket Depth and Clinical Attachment Level) were significantly reduced, and the values obtained were maintained up to the 12 months that the study lasts. At baseline, the most prevalent species were Pg, present in 66 percent of the sites, Tf (55 percent) and Td (41 percent). The deepest sites were related to the association Tf-Td (6.8 mm) and Tf-Td-Pi (7 mm). The number of positive sites for Td, Tf and Pg was significantly reduced after therapy. Conclusions: Scaling and root planning improve significantly clinical parameters as well as reduce the prevalence of periodontal pathogens Pg, Td and Tf in deep periodontal pockets. The results obtained were maintained up to 12 months. No further clinical attachment loss was found in 86 percent of the sites at 3 months and 79 percent at 12 months. The sites where the treatment failed in removing pathogens developed at 12 months greater probing pocket depths.

Uso de métodos complementares na inspeção post mortem de carcaças com suspeita de tuberculose bovina / Use of complementary methods in post mortem inspection of carcasses with suspected bovine tuberculosis

O objetivo foi utilizar métodos complementares de diagnóstico (histopatológicos, bacteriológicos e moleculares), no julgamento de lesões suspeitas de tuberculose observadas durante a inspeção post mortem de rotina em abatedouros. Foi acompanhado o abate e a inspeção de 41.193 bovinos, sadios ao exame ante mortem, em sete abatedouros no estado de Mato Grosso. Carcaças de 198 (0,48%) animais apresentaram lesões, sendo 182 (92,0%) classificadas como granulomatosas ou piogranulomatosas na avaliação histopatológica. Entretanto, na baciloscopia, não foi evidenciada a presença de bacilo álcool-ácido resistente (BAAR). Mycobacterium bovis foi isolado em três (1,5%) lesões, provenientes de linfonodos retrofaringeanos de bovinos com até três anos de idade. Quando usado a PCR múltipla (m-PCR) diretamente nos fragmentos de tecido, detectou-se a presença de DNA de M. bovis em 14 (7,0%) lesões, incluindo as três amostras identificadas na análise bacteriológica. O julgamento das lesões pelo exame macroscópico concordou em 93,0% (184/198) com os resultados obtidos por meio da PCR. A fim de evitar equívocos durante a avaliação, principalmente das lesões paucibacilares, como as encontradas neste estudo, recomenda-se a utilização de testes complementares rápidos e confirmatórios. A m-PCR, associada à inspeção post mortem de rotina, demonstrou ser uma técnica promissora para a vigilância da tuberculose bovina em abatedouros, contribuindo para o sucesso do programa de erradicação da tuberculose bovina.

The aim of this study was used diagnostic methods (histopathological, bacteriological and molecular) in the trial of suspected tuberculosis lesions observed during routine post mortem inspection in abattoirs. A total of of 41,193 cattle, which appeared healthy in ante mortem examination, slaughtered in seven abattoirs in the state of Mato Grosso, Brazil were examined. The carcasses of 198 (0.48%) animals showed lesions, of which 182 (91.9%) were classified as granulomatous or pyogranulomatous by histopathological analysis. However, at bacilloscopy, the presence of acid-fast bacilli (AFB) was not detected. Mycobacterium bovis was recovered from 3 (1.5%) samples, all from retropharyngeal lymph nodes in cattle up to three years old. When multiplex PCR (m-PCR) was performed directly on fragments of injured tissue, M. bovis DNA was detected in 14 (7.0%) samples including the same 3 bacteriologically positive samples. Evaluation of lesions by macroscopic analysis agreed 93% (184/198) with bacteriological culturing and the molecular test. To avoid misinterpretation during the examination, mainly of paucibacillary lesions such as those found in the samples analyzed, the use of rapid and unequivocal complementary tests such as mPCR is recommended. Molecular diagnosis, combined with routine post mortem inspection, proved to be a promising technique to improve the surveillance of TB in abattoirs, contributing to the success of the bovine tuberculosis eradication program.